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A molecular biologist treats a 600-kb length of linear DNA with HindIII restriction endonuclease.Following gel electrophoresis,the biologist observes that there is only one band on the gel corresponding with the migration distance of the 200-kb molecular weight marker.Assuming that no procedural errors were made,what can be concluded from these results?


A) Two HindIII recognition sequences were present in the original DNA.
B) Three HindIII recognition sequences were present in the original DNA.
C) There were no HindIII recognition sequences present in the original DNA.
D) One HindIII recognition sequence was present in the original DNA.

E) A) and D)
F) None of the above

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Cloning a gene involves all of the following except


A) isolating the fragment of DNA containing the desired gene.
B) insertion of the gene into an appropriate vector.
C) expression of the vector and the gene in a cell-free environment.
D) introducing ligated DNA into
E) coli cells.

F) A) and C)
G) B) and C)

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When separating DNA fragments by gel electrophoresis,what is the purpose of including molecular weight markers?


A) Markers are used as a control to determine the relative size of restriction fragments.
B) Markers provide an indication as to the total number of restriction fragments on the gel.
C) Markers are needed to estimate the relative charges on each of the restriction fragments.
D) Markers ensure that fragments having a greater molecular weight migrate at the same rate as those having a lighter molecular weight.

E) All of the above
F) B) and D)

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Which of the following is true about restriction endonucleases?


A) They make a blunt cut on the two DNA strands so that there are no single-strand regions.
B) They make staggered cuts on the DNA so that single-strand ends are formed that can be used to insert foreign DNA cut with the same enzyme.
C) Some make a blunt cut on the two DNA strands so that there are no single-strand regions and some make staggered cuts on the DNA so that single-strand ends are formed that can be used to insert foreign DNA cut with the same enzyme.
D) Depending on the incubation conditions,the same enzyme can either make a blunt cut on the two DNA strands so that there are no single-strand regions OR make staggered cuts on the DNA so that single-strand ends are formed that can be used to insert foreign DNA cut with the same enzyme.

E) None of the above
F) B) and D)

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C

Which of the following PCR procedures includes all of the others?


A) DNA is amplified for one cycle.
B) DNA is denatured at 95oC.
C) DNA is reannealed at 50oC
D) Primers are extended at 72oC.

E) B) and C)
F) A) and D)

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Electroporation is commonly used to introduce recombinant DNA molecules into cells.

A) True
B) False

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Transposons are frequently used as cloning vectors.

A) True
B) False

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An enzyme that cleaves internal phosphodiester bonds of a DNA molecule is a (n)


A) exonuclease.
B) endonuclease.
C) ligase.
D) methylase.

E) A) and B)
F) C) and D)

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You and a friend are student assistants in a research laboratory that investigates the anti-cancer properties of proteins isolated from marine organisms.Your friend mentions that she is using a BAC vector to insert shark DNA into Escherichia coli,but after repeated attempts,has found that the bacterial cells fail to synthesize the encoded protein.What is your advice?


A) If the shark DNA is unmodified,it contains introns that are not recognized by bacteria,therefore protein synthesis will not occur.
B) Since shark DNA is eukaryotic,the cloning vector should be a YAC derived from yeast rather than a BAC derived from bacteria.
C) It is impossible to clone eukaryotic DNA into a bacterial host,since eukaryotic DNA has introns and prokaryotic DNA does not.
D) Because Escherichia coli is not naturally competent,it cannot serve as the cloning host for foreign DNA.

E) B) and C)
F) C) and D)

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The enzyme reverse transcriptase was discovered by


A) Arber and Smith.
B) Jackson,Symons,and Berg.
C) Boyer and Cohen.
D) Temin and Baltimore.

E) B) and C)
F) C) and D)

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When a eukaryotic gene is expressed in a bacterium,the eukaryotic regulatory sequences should be maintained in order to achieve maximum expression of the gene.

A) True
B) False

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Which procedure is most useful in quantifying the active transcription of botulism toxin genes in a can of food that is contaminated?


A) Southern blot
B) End-point PCR
C) Real-time PCR
D) DNA hybridization

E) All of the above
F) C) and D)

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The thermostable enzyme most commonly used in PCR is reverse transcriptase.

A) True
B) False

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False

Restriction endonucleases were discovered by


A) Arber and Smith.
B) Jackson,Symons,and Berg.
C) Boyer and Cohen.
D) Temin and Baltimore.

E) B) and C)
F) C) and D)

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In order to express eukaryotic genes in a bacterium,the __________ must first be removed.


A) introns
B) exons
C) enhancers
D) 3' poly A sequence

E) None of the above
F) A) and B)

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Promoters for genes that code for proteins can be isolated from a cDNA library.

A) True
B) False

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Which of the following best describes the basis for separation of DNA fragments during agarose gel electrophoresis?


A) The fragments with the highest percentage of G and C will migrate fastest.
B) The fragments with the highest percentage of A and T will migrate fastest.
C) The largest fragments will migrate fastest.
D) The smallest fragments will migrate fastest.

E) All of the above
F) A) and B)

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D

Plasmid vectors often contain __________ genes that can be used to screen for recombinants.


A) metabolic activation
B) antibiotic resistance
C) insertion sequence
D) promoter/operator

E) B) and C)
F) A) and B)

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Which of the following is not part of a yeast artificial chromosome (YAC) ?


A) the F factor
B) a selectable marker
C) an ARS
D) a CEN sequence

E) B) and D)
F) All of the above

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A microbiologist would like to use a noncompetent genus of streptococcal bacteria,Enterococcus faecalis,as a cloning host to express genes from Streptococcus pneumoniae,which is naturally competent.Is this possible?


A) Yes; electroporation or chemical transformation can be used to make Enterococcus competent,and then genes from Streptococcus can be introduced via a cloning vector.
B) Yes; electroporation or chemical transformation can be used to make non-competent Streptococcus mutants,from which genes can be inserted into a cloning vector and introduced into Enterococcus.
C) No; competence factor is an essential protein that enables the uptake of foreign DNA,therefore a cloning host such as Enterococcus that lacks competence factor protein is unable to be transformed by electroporation or chemical transformation.
D) Yes; since the cloning host and the DNA to be introduced are both from bacteria that are streptococci,natural competence in this case is not necessary as long as the appropriate vector is used.

E) B) and C)
F) None of the above

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